STRINGSTRING
upp protein (Ochrobactrum anthropi) - STRING interaction network
"upp" - Uracil phosphoribosyltransferase in Ochrobactrum anthropi
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uppUracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate (208 aa)    
Predicted Functional Partners:
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP (240 aa)
     
 
  0.959
pyrF
Orotidine 5’-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5’- monophosphate (OMP) to uridine 5’-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily (241 aa)
   
 
  0.951
Oant_3872
PFAM- amidohydrolase; Amidohydrolase 3; KEGG- vei-Veis_3139 amidohydrolase 3 (393 aa)
   
 
  0.928
Oant_3311
PFAM- amidohydrolase; Amidohydrolase 3; KEGG- ret-RHE_PB00107 cytosine deaminase protein (429 aa)
   
 
  0.928
Oant_0365
TIGRFAM- dihydroorotate dehydrogenase family protein; PFAM- dihydroorotate dehydrogenase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG- bmb-BruAb1_0308 dihydropyrimidine dehydrogenase (436 aa)
     
 
  0.925
cmk
TIGRFAM- cytidylate kinase; PFAM- cytidylate kinase region; KEGG- bme-BMEI1916 cytidylate kinase; Belongs to the cytidylate kinase family. Type 1 subfamily (214 aa)
   
 
    0.906
Oant_2150
TIGRFAM- MazG family protein; PFAM- MazG nucleotide pyrophosphohydrolase; KEGG- bms-BR1067 mazG family protein (274 aa)
       
    0.903
surE
5’-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5’-monophosphates; Belongs to the SurE nucleotidase family (258 aa)
         
  0.901
Oant_0366
PFAM- FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG- bme-BMEI1638 glutamate synthase (NADPH) small chain (500 aa)
         
    0.900
Oant_2905
TIGRFAM- sugar-phosphate isomerase, RpiB/LacA/LacB family; PFAM- Ribose/galactose isomerase; KEGG- bme-BMEII0424 ribose 5-phosphate isomerase (152 aa)
   
 
  0.888
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi ATCC49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
Server load: low (11%) [HD]