STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_1424KEGG: bms:BRA0937 sugar ABC transporter, periplasmic sugar-binding protein. (354 aa)    
Predicted Functional Partners:
Oant_1426
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bmb:BruAb2_0298 sugar ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.990
Oant_1425
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb2_0297 sugar ABC transporter, ATP-binding protein.
 
 0.987
Oant_1415
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: atc:AGR_L_3179 hypothetical ABC transporter permease protein YjfF.
  
  0.954
Oant_1417
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_L_3184 putative ATP-binding component of ABC transporter.
 
 0.937
Oant_1418
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: atc:AGR_L_3185 putative LACI-type transcriptional regulator.
 
  
 0.710
Oant_3416
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bmb:BruAb2_1089 XylH, D-xylose ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.682
Oant_1420
Galactose 1-dehydrogenase; PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bmb:BruAb2_0292 D-galactose 1-dehydrogenase, hypothetical.
 
     0.586
Oant_1416
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: atc:AGR_L_3181 putative transport system permease protein.
 
     0.535
Oant_1422
PFAM: 2-keto-3-deoxy-galactonokinase; KEGG: bms:BRA0939 2-dehydro-3-deoxygalactonokinase.
       0.526
Oant_1423
PFAM: KDPG and KHG aldolase; KEGG: bmb:BruAb2_0295 2-dehydro-3-deoxyphosphogalactonate aldolase, hypothetical.
       0.523
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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