STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_1428PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_C_259 probable ABC transporter. (267 aa)    
Predicted Functional Partners:
Oant_1429
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_C_257 nitrate transport protein NrtB.
 
  
 0.964
Oant_1430
NMT1/THI5 like domain protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; NMT1/THI5 like domain protein; KEGG: atc:AGR_C_256 hypothetical protein.
 
  
 0.919
Oant_3505
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21528 putative taurine uptake ABC transporter permease protein.
  
 0.829
Oant_3592
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb2_0755 hypothetical taurine ABC transporter, permease protein.
  
 0.827
Oant_3514
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B0493 ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit.
 
  
 0.773
Oant_3590
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb2_0895 ABC transporter, permease protein.
 
  
 0.773
Oant_0278
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb1_0206 ABC transporter, permease protein.
 
  
 0.692
Oant_3589
PFAM: NMT1/THI5 like domain protein; KEGG: bmb:BruAb2_0896 hypothetical ABC transporter, periplasmic binding protein.
 
  
 0.576
Oant_3871
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_3145 binding-protein-dependent transport systems inner membrane component.
  
 0.572
Oant_1427
PFAM: aminotransferase class IV; KEGG: bms:BRA0934 D-alanine aminotransferase, putative.
       0.547
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.