STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutITIGRFAM: imidazolonepropionase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: bmb:BruAb2_0304 HutI, imidazolonepropionase; Belongs to the metallo-dependent hydrolases superfamily. HutI family. (405 aa)    
Predicted Functional Partners:
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
 
 0.998
Oant_1437
TIGRFAM: formiminoglutamate deiminase; PFAM: amidohydrolase; KEGG: bmb:BruAb2_0305 atrazine chlorohydrolase.
 
 
 0.989
hutH
TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase; KEGG: bmb:BruAb2_0303 HutH, histidine ammonia-lyase; Belongs to the PAL/histidase family.
 
  
 0.984
Oant_1434
PFAM: N-formylglutamate amidohydrolase; KEGG: bme:BMEII0366 formiminoglutamase.
 
  
 0.926
Oant_1438
Transcriptional regulator, GntR family; TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bms:BRA0927 histidine utilization repressor.
 
  
 0.893
Oant_1431
PFAM: protein of unknown function DUF886; KEGG: bme:BMEII0364 hypothetical protein.
 
   
 0.787
Oant_4283
PFAM: N-formylglutamate amidohydrolase; KEGG: bmb:BruAb2_0044 hypothetical formiminoglutamase.
  
  
 0.787
Oant_3583
Transcriptional regulator, GntR family; TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: mlo:mlr7110 transcriptional regulator.
 
  
 0.722
Oant_1432
PFAM: nucleoside recognition domain protein; KEGG: sme:SMc00668 hypothetical, transmembrane protein.
 
     0.673
Oant_2499
TIGRFAM: putative agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: bms:BR0789 agmatinase, putative; Belongs to the arginase family.
  
  
 0.495
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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