STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_1457KEGG: bms:BRA0910 hypothetical protein; Belongs to the UPF0309 family. (242 aa)    
Predicted Functional Partners:
Oant_1454
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bme:BMEII0383 transcriptional regulator, gntR family.
 
     0.849
Oant_1456
TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; KEGG: bmb:BruAb2_0322 NagA, N-acetylglucosamine-6-phosphate deacetylase.
 
     0.839
Oant_1455
Glutamine--fructose-6-phosphate transaminase (isomerizing); PFAM: sugar isomerase (SIS); KEGG: bmb:BruAb2_0321 NagB, glucosamine-fructose-6-phosphate aminotransferase.
       0.791
Oant_1452
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bms:BRA0915 secretion protein, putative; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.558
Oant_1451
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bms:BRA0916 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.557
Oant_4121
PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: vei:Veis_2221 phosphotransferase system, lactose/cellobiose-specific IIB subunit.
 
    0.554
Oant_1453
PFAM: acriflavin resistance protein; KEGG: bms:BRA0914 AcrB/AcrD/AcrF multidrug efflux protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.550
purU
Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
       0.478
Oant_3892
Transcriptional regulator, RpiR family; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bms:BRA0744 transcriptional regulator, RpiR family.
 
     0.477
Oant_4120
Putative PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: vei:Veis_2222 putative PTS IIA-like nitrogen-regulatory protein PtsN.
 
     0.454
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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