STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_1587PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb1_1568 glycine betaine/L-proline ABC transporter. (350 aa)    
Predicted Functional Partners:
Oant_1588
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bme:BMEI0440 glycine betaine/L-proline transport system permease protein ProW.
 0.999
Oant_1589
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bms:BR1579 glycine betaine/L-proline ABC transporter, periplasmic glycine betaine-binding protein, putative.
 
 0.997
Oant_3888
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA0739 glycine betaine/L-proline ABC transporter, permease protein, putative.
 0.996
Oant_3324
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: atc:AGR_L_470 hypothetical protein.
 
 0.991
Oant_2920
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: rle:RL3533 putative solute-binding component of ABC transporter.
 
 0.990
Oant_3887
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bms:BRA0738 glycine betaine/L-proline ABC transporter, periplasmic glycine betaine-binding protein, putative.
 
 0.990
Oant_3889
TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase; KEGG: bme:BMEII0548 glycine betaine/l-proline transport ATP-binding protein ProV.
  
  
 
0.909
Oant_0296
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR0222 ABC transporter, permease protein.
  
 0.438
Oant_0299
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bmb:BruAb1_0220 ABC transporter, periplasmic substrate-binding protein, hypothetical.
  
 
 0.431
Oant_3338
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bmf:BAB2_0428 ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase.
  
  
 
0.422
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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