STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_1589PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bms:BR1579 glycine betaine/L-proline ABC transporter, periplasmic glycine betaine-binding protein, putative. (322 aa)    
Predicted Functional Partners:
Oant_1587
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb1_1568 glycine betaine/L-proline ABC transporter.
 
 0.997
Oant_1588
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bme:BMEI0440 glycine betaine/L-proline transport system permease protein ProW.
 
 0.995
Oant_3889
TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase; KEGG: bme:BMEII0548 glycine betaine/l-proline transport ATP-binding protein ProV.
 
 0.986
Oant_3888
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA0739 glycine betaine/L-proline ABC transporter, permease protein, putative.
 
 0.979
betI
Transcriptional regulator, TetR family; Repressor involved in the biosynthesis of the osmoprotectant glycine betaine. It represses transcription of the choline transporter BetT and the genes of BetAB involved in the synthesis of glycine betaine (By similarity).
 
     0.705
Oant_3887
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bms:BRA0738 glycine betaine/L-proline ABC transporter, periplasmic glycine betaine-binding protein, putative.
  
  
 
0.522
Oant_1711
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bme:BMEI0548 flavohemoprotein.
  
  
 0.442
Oant_0299
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bmb:BruAb1_0220 ABC transporter, periplasmic substrate-binding protein, hypothetical.
   
 
 0.425
Oant_2107
Protein of unknown function DUF140; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; protein of unknown function DUF140; KEGG: bmb:BruAb1_1024 hypothetical toulene ABC transporter, permease protein.
     
 0.418
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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