STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_1659PFAM: protein of unknown function DUF1176; KEGG: bmb:BruAb1_1498 hypothetical protein. (347 aa)    
Predicted Functional Partners:
Oant_2680
KEGG: bms:BR0580 hypothetical protein.
  
     0.735
Oant_2682
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: bmb:BruAb1_0599 hypothetical peptidoglycan-binding protein.
  
     0.719
Oant_4196
PFAM: flagellar hook-length control protein; KEGG: bmb:BruAb2_1079 MotD-related protein.
  
     0.719
Oant_4029
KEGG: bmb:BruAb2_0441 hypothetical protein.
  
     0.710
Oant_0977
KEGG: bms:BR1885 hypothetical protein.
  
     0.676
Oant_1677
PFAM: NUDIX hydrolase; KEGG: bmb:BruAb1_1485 MutT/nudix family protein.
  
     0.675
Oant_2350
PFAM: Sporulation domain protein; KEGG: bmb:BruAb1_0890 hypothetical protein.
  
     0.669
Oant_1702
KEGG: bmb:BruAb1_1464 hypothetical protein.
  
     0.628
Oant_1769
PFAM: AsmA family protein; KEGG: bms:BR1408 hypothetical protein.
  
     0.626
Oant_4224
PFAM: regulatory protein LuxR; KEGG: bmb:BruAb2_0117 transcriptional regulator, LuxR family.
  
     0.623
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.