STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_1702KEGG: bmb:BruAb1_1464 hypothetical protein. (283 aa)    
Predicted Functional Partners:
Oant_1703
Penicillin amidase; PFAM: Choloylglycine hydrolase; KEGG: bmb:BruAb1_1463 choloylglycine hydrolase family protein.
 
     0.677
Oant_1659
PFAM: protein of unknown function DUF1176; KEGG: bmb:BruAb1_1498 hypothetical protein.
  
     0.628
Oant_1699
PFAM: Choloylglycine hydrolase; KEGG: atc:AGR_L_573 probable hydrolase VCA0877.
 
     0.607
Oant_2593
PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: bms:BR0695 hypothetical protein.
 
     0.527
Oant_3924
PFAM: AsmA family protein; KEGG: bmb:BruAb1_1595 AsmA family protein.
  
     0.499
Oant_1701
KEGG: rpc:RPC_3303 hypothetical protein.
  
    0.491
Oant_2350
PFAM: Sporulation domain protein; KEGG: bmb:BruAb1_0890 hypothetical protein.
  
     0.462
Oant_2680
KEGG: bms:BR0580 hypothetical protein.
  
     0.459
Oant_1366
KEGG: bms:BRA1018 hypothetical protein.
  
     0.449
Oant_4196
PFAM: flagellar hook-length control protein; KEGG: bmb:BruAb2_1079 MotD-related protein.
  
     0.437
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.