STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_1731PFAM: heat shock protein DnaJ domain protein; KEGG: bms:BR1445 DnaJ domain protein. (236 aa)    
Predicted Functional Partners:
Oant_2157
PFAM: nitrogen-fixing NifU domain protein; KEGG: bmb:BruAb1_1079 NifU-related protein.
  
 
 0.985
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.856
Oant_0492
KEGG: bmb:BruAb1_0402 heat shock protein, Hsp70 family.
  
 
 0.835
Oant_1732
PFAM: Peptidoglycan-binding domain 1 protein; N-acetylmuramoyl-L-alanine amidase family 2; KEGG: bmb:BruAb1_1439 N-acetylmuramoyl-L-alanine amidase, family 2.
     
 0.820
Oant_2257
PFAM: aminotransferase class V; KEGG: bmb:BruAb1_0939 cysteine desulfurase, hypothetical.
  
 
 0.814
Oant_2247
FeS assembly scaffold SufA; TIGRFAM: iron-sulfur cluster assembly accessory protein; FeS assembly scaffold SufA; PFAM: HesB/YadR/YfhF-family protein; KEGG: bmb:BruAb1_0948 HesB/YadR/YfhF family protein; Belongs to the HesB/IscA family.
  
 
 0.710
Oant_2353
TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: bmb:BruAb1_0887 HesB/YadR/YfhF family protein; Belongs to the HesB/IscA family.
  
 
 0.710
Oant_2391
TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: bms:BR0835 glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily.
     
 0.513
Oant_1606
KEGG: bms:BR1559 hypothetical protein.
  
     0.506
Oant_1730
KEGG: bmb:BruAb1_1441 hypothetical protein.
       0.504
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.