STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_1828PFAM: transport system permease protein; KEGG: bms:BR1345 iron compound ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (333 aa)    
Predicted Functional Partners:
Oant_1829
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb1_1342 iron compound ABC transporter, ATP-binding protein.
 
 
 0.974
Oant_1827
PFAM: periplasmic binding protein; KEGG: bms:BR1346 iron compound ABC transporter, periplasmic iron compound-binding protein.
 
 
 0.969
hmuV
ABC transporter related; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
 
 0.943
Oant_3620
PFAM: periplasmic binding protein; KEGG: mes:Meso_1442 periplasmic binding protein.
 
 
 0.912
Oant_3914
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb2_0478 iron compound ABC transporter, ATP-binding protein.
 
 
 0.874
Oant_1826
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bmb:BruAb1_1345 hypothetical iron compound TonB-dependent receptor.
 
    0.860
Oant_4085
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pau:PA14_10180 ferric enterobactin transport protein FepC.
 
 
 0.855
Oant_3476
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_L_1656 ferrichrome transport ATP-binding protein FhuC.
 
 
 0.854
Oant_2824
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMa1741 putative iron uptake ABC transporter, ATP-binding protein.
 
 
 0.852
Oant_4137
PFAM: periplasmic binding protein; KEGG: sme:SMc01659 putative transport transmembrane protein.
 
 
 0.630
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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