STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_1905PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL4650 putative transmembrane component of ABC transporter. (365 aa)    
Predicted Functional Partners:
Oant_1904
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01527 putative dipeptide transport system permease ABC transporter protein.
    0.961
Oant_1903
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc01528 putative dipeptide transport ATP-binding ABC transporter protein.
 
   0.959
Oant_1902
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:RL4647 putative ATP-binding component of ABC transporter.
 
  
 0.936
Oant_1906
PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMc01525 putative dipeptide binding periplasmic protein.
   0.899
Oant_3528
PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMc01525 putative dipeptide binding periplasmic protein.
 
   0.826
Oant_3741
PFAM: extracellular solute-binding protein family 5; KEGG: atc:AGR_C_4574 putative hemin-binding lipoprotein.
 
   0.826
Oant_3090
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bhe:BH12160 ABC transporter, permease protein.
 
    0.823
Oant_3739
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_C_4571 dipeptide abc transporter, dipeptide-binding protein.
 
    0.823
Oant_3088
PFAM: extracellular solute-binding protein family 5; KEGG: bqu:BQ09580 ABC transporter, periplasmic oligopeptide-binding protein.
 
   0.822
Oant_1584
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bme:BMEI0436 dipeptide transport system permease protein DppC.
 
    0.795
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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