STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_1908KEGG: bms:BR1284 hypothetical protein. (212 aa)    
Predicted Functional Partners:
Oant_0919
KEGG: bms:BR2016 hypothetical protein.
  
     0.707
Oant_2111
KEGG: bmf:BAB1_1043 hypothetical protein.
  
     0.703
Oant_0173
PFAM: protein of unknown function DUF1150; KEGG: bmb:BruAb1_0158 hypothetical protein.
  
     0.684
Oant_2534
KEGG: bmb:BruAb1_0776 hypothetical protein.
  
     0.676
Oant_4197
KEGG: bmb:BruAb2_1080 hypothetical MotC chemotaxis protein.
  
    0.660
Oant_4196
PFAM: flagellar hook-length control protein; KEGG: bmb:BruAb2_1079 MotD-related protein.
  
     0.659
Oant_1573
KEGG: bmb:BruAb1_1582 hypothetical protein.
  
     0.657
Oant_1232
KEGG: bms:BR1681 hypothetical protein.
  
     0.655
Oant_0837
KEGG: bmb:BruAb1_2057 hypothetical protein.
  
     0.653
Oant_1818
PFAM: NUDIX hydrolase; KEGG: bmb:BruAb1_1371 hypothetical protein.
  
     0.636
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.