STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_1925PFAM: alpha/beta hydrolase fold; KEGG: bmb:BruAb1_1266 hydrolase, alpha/beta hydrolase fold family. (256 aa)    
Predicted Functional Partners:
Oant_2545
KEGG: bmb:BruAb1_0764 hypothetical protein.
 
     0.749
Oant_1568
KEGG: bmb:BruAb1_1587 hypothetical protein.
  
     0.736
Oant_2153
KEGG: bmb:BruAb1_1075 hypothetical protein.
  
     0.692
Oant_1924
PFAM: protein of unknown function DUF192; KEGG: bmb:BruAb1_1267 hypothetical protein.
       0.670
Oant_1572
PFAM: uncharacterised conserved protein UCP033924; KEGG: bmb:BruAb1_1583 hypothetical protein.
  
     0.627
Oant_2678
PFAM: protein of unknown function DUF1214; KEGG: bmb:BruAb1_0603 hypothetical protein.
  
     0.621
Oant_2615
KEGG: bms:BR0671 hypothetical protein.
  
     0.609
Oant_3637
PFAM: Invasion associated locus B family protein; KEGG: bmb:BruAb2_0649 hypothetical protein.
  
     0.609
Oant_1923
PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bms:BR1266 cold-shock family protein.
 
 
   0.601
Oant_0401
KEGG: bms:BR0308 hypothetical protein.
  
     0.599
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.