STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_1997PFAM: aldo/keto reductase; KEGG: sth:STH658 oxidoreductase. (281 aa)    
Predicted Functional Partners:
Oant_0197
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 0.571
trmJ
RNA methyltransferase, TrmH family, group 1; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.
       0.559
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
       0.559
Oant_1994
TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: bms:BR1197 ThiJ/PfpI family protein.
  
  
 0.546
Oant_1146
PFAM: aldo/keto reductase; KEGG: aav:Aave_3016 aldo/keto reductase.
 
 
0.504
Oant_3708
PFAM: aldo/keto reductase; KEGG: atc:AGR_C_2023 hypothetical protein.
 
 
0.488
Oant_0357
Pyridoxal 4-dehydrogenase; PFAM: aldo/keto reductase; KEGG: atc:AGR_L_2031 hypothetical protein.
 
 
 0.485
Oant_0794
PFAM: aldo/keto reductase; KEGG: rle:RL0272 putative aldo-keto reductase/oxidoreductase.
 
 
0.476
Oant_3076
PFAM: aldo/keto reductase; KEGG: ret:RHE_PB00074 probable aldoketo reductase protein.
 
 
0.469
Oant_2714
HAD-superfamily hydrolase, subfamily IIB; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.465
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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