STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_1998KEGG: mlo:mll1484 hypothetical protein. (178 aa)    
Predicted Functional Partners:
Oant_2560
PFAM: protein of unknown function UPF0118; KEGG: sme:SMa0136 hypothetical protein.
  
     0.721
Oant_2321
Putative phage repressor; PFAM: helix-turn-helix domain protein; peptidase S24 S26A and S26B; KEGG: atc:AGR_C_784 hypothetical protein.
  
     0.680
Oant_1999
PFAM: protein of unknown function DUF1452; KEGG: atc:AGR_pAT_399 hypothetical protein.
       0.558
Oant_3451
TIGRFAM: outer membrane autotransporter barrel domain; PFAM: Pertactin; Autotransporter beta- domain protein; KEGG: atc:AGR_pAT_528 hypothetical protein.
  
     0.558
Oant_2857
KEGG: pde:Pden_0476 thioesterase superfamily protein.
  
     0.514
apnL
Conserved hypothetical protein; Involved in catabolism of D-apiose. Hydrolyzes D- apionolactone to D-apionate.
  
     0.457
Oant_4108
PFAM: Glucitol operon activator; KEGG: mlo:mll3616 unknown protein.
  
     0.431
Oant_0260
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sus:Acid_2376 methyltransferase type 11.
  
     0.422
Oant_0516
KEGG: ret:RHE_PE00140 hypothetical protein.
  
     0.408
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.