STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_2017PFAM: uncharacterised conserved protein UCP032025; KEGG: bmb:BruAb1_1180 hypothetical protein. (145 aa)    
Predicted Functional Partners:
Oant_0518
KEGG: bmb:BruAb1_0423 hypothetical protein.
  
     0.675
Oant_0151
PFAM: protein of unknown function DUF1052; KEGG: bms:BR0138 hypothetical protein.
  
     0.631
Oant_2016
TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; KEGG: bms:BR1175 L-serine dehydratase, iron-sulfur-dependent, single chain form.
       0.622
Oant_0340
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bms:BR0274 sensor histidine kinase.
  
     0.611
Oant_1607
TIGRFAM: conserved hypothetical membrane protein; KEGG: bms:BR1558 hypothetical protein.
  
     0.604
Oant_3673
PFAM: protein of unknown function DUF983; KEGG: bms:BRA0606 hypothetical protein.
  
     0.589
Oant_3674
PFAM: NUDIX hydrolase; KEGG: bms:BRA0607 MutT/NUDIX family protein.
  
     0.569
Oant_0327
KEGG: bmb:BruAb1_0281 hypothetical protein.
  
     0.550
Oant_1610
PFAM: protein of unknown function DUF1285; KEGG: bmb:BruAb1_1544 hypothetical protein.
  
     0.507
Oant_0325
PFAM: uncharacterised conserved protein UCP032146; KEGG: bmb:BruAb1_0279 hypothetical protein; Belongs to the UPF0262 family.
  
     0.487
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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