STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_2058PFAM: Septum formation initiator; KEGG: bmb:BruAb1_1136 hypothetical protein. (109 aa)    
Predicted Functional Partners:
ftsQ
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
 
 
 
 0.973
Oant_0611
PFAM: protein of unknown function DUF1159; KEGG: bms:BR0494 hypothetical protein.
  
     0.719
Oant_1338
PFAM: Glutathione S-transferase domain; KEGG: bmb:BruAb2_0984 glutathione S-transferase family protein.
  
     0.625
Oant_1738
Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: bmb:BruAb1_1432 penicillin-binding protein.
 
 
 0.618
Oant_1743
TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: bmb:BruAb1_1427 FtsW, cell division protein; Belongs to the SEDS family.
 
 
 
 0.576
Oant_2060
Transketolase central region; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
    0.573
Oant_0818
TIGRFAM: Double-strand break repair protein AddB; KEGG: bmb:BruAb1_2077 hypothetical protein.
  
     0.572
Oant_2599
PFAM: DNA polymerase III chi subunit HolC; KEGG: bmb:BruAb1_0709 DNA polymerase III chi subunit.
  
     0.572
Oant_2574
KEGG: bms:BR0714 hypothetical protein.
 
    0.567
Oant_0817
TIGRFAM: Double-strand break repair helicase AddA; PFAM: UvrD/REP helicase; KEGG: bme:BMEI2023 ATP-dependent nuclease subunit A; Belongs to the helicase family. UvrD subfamily.
  
     0.566
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.