STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_2134PFAM: UspA domain protein; KEGG: bmb:BruAb1_1052 hypothetical protein. (281 aa)    
Predicted Functional Partners:
Oant_2135
PFAM: molybdopterin binding domain; KEGG: bms:BR1048 CinA-related protein.
       0.600
Oant_2901
PFAM: NnrS family protein; KEGG: bms:BRA0283 putative uncharacterized protein involved in response to NO.
  
     0.505
Oant_0409
Integral membrane sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bms:BR0316 sensor histidine kinase/response regulator.
     
 0.458
gpt
Xanthine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.
       0.458
Oant_2896
KEGG: bmb:BruAb2_0887 hypothetical protein.
  
     0.451
Oant_2136
TIGRFAM: flavoprotein WrbA; PFAM: NADPH-dependent FMN reductase; flavodoxin/nitric oxide synthase; KEGG: bms:BR1049 trp repressor binding protein.
  
  
 0.442
hpf
Sigma 54 modulation protein/ribosomal protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
   
  
 0.430
Oant_0194
TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: bmb:BruAb1_0181 Ogt, methylated-DNA--protein-cysteine methyltransferase.
  
    0.417
Oant_3117
KEGG: bms:BRA0291 hypothetical protein.
  
    0.403
Oant_0464
PFAM: FixH family protein; KEGG: bms:BR0358 FixH protein, putative.
 
    0.400
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.