STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_2287PFAM: glycoside hydrolase family 24; KEGG: sit:TM1040_1305 glycoside hydrolase, family 24. (168 aa)    
Predicted Functional Partners:
Oant_2286
Hypothetical protein.
       0.785
Oant_2289
PFAM: phage late control D family protein; KEGG: nha:Nham_2371 phage late control D.
 
  
 0.624
Oant_1487
KEGG: stm:STM2696 Fels-2 prophage: similar to genes in phage phiCTX.
 
    0.549
Oant_2290
PFAM: phage tail X family protein; KEGG: nha:Nham_3320 phage tail X.
 
    0.523
Oant_1498
PFAM: Baseplate J family protein; KEGG: syf:Synpcc7942_0740 GPJ of phage P2-like.
 
  
 0.507
Oant_2291
PFAM: phage P2 GpU family protein; KEGG: nha:Nham_2373 phage P2 GpU.
 
    0.472
Oant_1499
PFAM: GPW/gp25 family protein; KEGG: nha:Nham_3332 gpW/GP25.
 
    0.466
Oant_1495
KEGG: bhe:BH03150 virulence-associated protein.
 
     0.465
Oant_2295
PFAM: phage tail sheath protein; KEGG: nha:Nham_3326 phage tail sheath protein.
 
    0.459
Oant_2288
KEGG: rle:RL3922 hypothetical protein.
       0.435
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.