STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_2292TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: dvu:DVU1107 tail tape measure protein. (793 aa)    
Predicted Functional Partners:
Oant_2291
PFAM: phage P2 GpU family protein; KEGG: nha:Nham_2373 phage P2 GpU.
 
    0.948
Oant_2290
PFAM: phage tail X family protein; KEGG: nha:Nham_3320 phage tail X.
 
    0.921
Oant_2294
PFAM: phage major tail tube protein; KEGG: nha:Nham_3325 phage major tail tube protein.
 
  
 0.865
Oant_2295
PFAM: phage tail sheath protein; KEGG: nha:Nham_3326 phage tail sheath protein.
 
  
 0.855
Oant_2298
TIGRFAM: phage tail protein I; KEGG: nha:Nham_2381 phage tail protein I.
 
  
 0.826
Oant_2299
PFAM: Baseplate J family protein; KEGG: nha:Nham_2382 baseplate J-like protein.
 
  
 0.817
Oant_2300
PFAM: GPW/gp25 family protein; KEGG: nha:Nham_2383 gpW/GP25.
 
    0.815
Oant_2302
KEGG: nha:Nham_2384 phage-related baseplate assembly protein V.
 
  
 0.772
Oant_2289
PFAM: phage late control D family protein; KEGG: nha:Nham_2371 phage late control D.
 
  
 0.763
Oant_1498
PFAM: Baseplate J family protein; KEGG: syf:Synpcc7942_0740 GPJ of phage P2-like.
 
  
 0.753
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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