STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_2318PFAM: ParB domain protein nuclease; MT-A70 family protein; KEGG: spj:MGAS2096_Spy1128 adenine-specific methyltransferase; Belongs to the MT-A70-like family. (435 aa)    
Predicted Functional Partners:
Oant_0254
KEGG: bxe:Bxe_A3072 hypothetical protein.
  
    0.914
Oant_2313
KEGG: mlo:mlr8518 hypothetical protein.
 
     0.841
Oant_2314
KEGG: nar:Saro_2694 hypothetical protein.
     
 0.792
Oant_2315
KEGG: mlo:mlr8516 hypothetical protein.
       0.781
Oant_2312
PFAM: transcription antitermination protein NusG; KEGG: atc:AGR_C_797 transcription antitermination protein NusG.
       0.779
Oant_2317
KEGG: mes:Meso_1205 hypothetical protein.
       0.778
Oant_2316
KEGG: mlo:msr8512 hypothetical protein.
       0.773
Oant_2319
Hypothetical protein.
       0.546
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  0.516
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
   
 
  0.509
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.