STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_2378PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bme:BMEI1118 biphenyl-2,3-diol 1,2-dioxygenase III. (318 aa)    
Predicted Functional Partners:
Oant_0424
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mlo:mll3759 similar to ABC transporter (binding protein).
 
  
 0.678
Oant_0423
PFAM: phospholipase/Carboxylesterase; Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pde:Pden_0331 glyoxalase/bleomycin resistance protein/dioxygenase.
 
  
 0.674
Oant_1369
KEGG: bms:BRA0989 hypothetical protein.
 
    0.606
Oant_3329
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMb21202 hypothetical protein.
 
  
 0.598
Oant_2379
PFAM: protein of unknown function DUF1234; KEGG: bms:BR0845 hypothetical protein.
       0.531
Oant_3330
PFAM: phospholipase/Carboxylesterase; KEGG: sme:SMb21203 putative esteraselipase/thioesterase protein.
 
    0.500
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.