STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_2401PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: pae:PA0741 hypothetical protein. (213 aa)    
Predicted Functional Partners:
Oant_1574
KEGG: bmb:BruAb1_1581 hypothetical protein.
  
    0.784
Oant_3140
KEGG: eli:ELI_07890 predicted ATP-dependent endonuclease, OLD family protein.
   
    0.725
Oant_2400
Transcriptional regulator, HxlR family; PFAM: helix-turn-helix HxlR type; KEGG: mlo:mlr2600 hypothetical protein.
 
  
 0.699
Oant_0950
PFAM: GCN5-related N-acetyltransferase; KEGG: bmb:BruAb1_1881 acetyltransferase, GNAT family.
   
    0.695
Oant_1698
PFAM: CsbD family protein; KEGG: sme:SMb21330 hypothetical protein with amino acid permeases signature; Belongs to the UPF0337 (CsbD) family.
   
    0.693
Oant_1566
PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: oih:OB0403 PhnB protein.
  
    0.476
Oant_3025
PFAM: helix-turn-helix HxlR type; KEGG: mes:Meso_2124 transcriptional regulator, HxlR family.
  
  
 0.413
Oant_2547
PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: bxe:Bxe_A3278 putative 3-demethylubiquinone-93-methyltransferase protein.
   
    0.408
Oant_3639
PFAM: DSBA oxidoreductase; KEGG: bms:BRA0577 FrnE protein, putative.
 
    0.400
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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