STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_2437PFAM: Gluconate transporter; Citrate transporter; KEGG: bja:bll7963 hypothetical protein. (479 aa)    
Predicted Functional Partners:
Oant_2438
PFAM: HupE/UreJ protein; KEGG: atc:AGR_C_4126 hupe protein precursor.
       0.673
Oant_2436
MgtC/SapB transporter; Virulence factor required for growth in low Mg(2+) medium and for intramacrophage survival. May be involved in regulating membrane potential by activating Na(+)/K(+)-ATPase. Belongs to the MgtC/SapB family.
 
     0.498
ureF2
Urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
       0.497
Oant_2449
PFAM: protein of unknown function UPF0118; KEGG: sme:SMa1676 hypothetical protein.
  
     0.421
Oant_2435
KEGG: mlo:mll6732 hypothetical protein.
 
     0.405
Oant_2450
PFAM: amidohydrolase; Amidohydrolase 3; KEGG: gbe:GbCGDNIH1_1040 prolidase.
  
     0.401
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.