STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ureA-2TIGRFAM: urease, gamma subunit; PFAM: Urease gamma subunit region; KEGG: mfa:Mfla_1769 urease, gamma subunit; Belongs to the urease gamma subunit family. (100 aa)    
Predicted Functional Partners:
ureB
TIGRFAM: urease, beta subunit; PFAM: Urease beta subunit; KEGG: bmb:BruAb1_0295 UreB-1, urease, beta subunit; Belongs to the urease beta subunit family.
 0.999
ureC
TIGRFAM: urease, alpha subunit; PFAM: amidohydrolase; Urease alpha-subunit domain protein; KEGG: bms:BR0270 urease, alpha subunit.
 0.999
ureC-2
TIGRFAM: urease, alpha subunit; PFAM: amidohydrolase; Urease alpha-subunit domain protein; Amidohydrolase 3; KEGG: abo:ABO_2719 urease, alpha subunit.
 0.999
ureB-2
TIGRFAM: urease, beta subunit; PFAM: Urease beta subunit; KEGG: reu:Reut_A0994 urease, beta subunit; Belongs to the urease beta subunit family.
 0.999
ureD2
Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
 
 0.967
ureG
Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
 
  
 0.944
ureF2
Urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
 
 0.941
ureF1
Urease accessory protein UreF, putative; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
 
 0.909
Oant_1470
Arginase; TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: bmb:BruAb2_0333 RocF, arginase; Belongs to the arginase family.
    
  0.902
ureA
TIGRFAM: urease, gamma subunit; PFAM: Urease gamma subunit region; KEGG: bmb:BruAb1_0294 UreA-1, urease, gamma subunit; Belongs to the urease gamma subunit family.
  
  
 
0.901
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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