STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_2450PFAM: amidohydrolase; Amidohydrolase 3; KEGG: gbe:GbCGDNIH1_1040 prolidase. (478 aa)    
Predicted Functional Partners:
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
  
 0.827
hutH
TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase; KEGG: bmb:BruAb2_0303 HutH, histidine ammonia-lyase; Belongs to the PAL/histidase family.
  
  
 0.826
Oant_2449
PFAM: protein of unknown function UPF0118; KEGG: sme:SMa1676 hypothetical protein.
  
    0.679
Oant_2451
KEGG: pau:PA14_04180 hypothetical protein.
  
    0.673
Oant_1434
PFAM: N-formylglutamate amidohydrolase; KEGG: bme:BMEII0366 formiminoglutamase.
  
  
 0.499
Oant_4283
PFAM: N-formylglutamate amidohydrolase; KEGG: bmb:BruAb2_0044 hypothetical formiminoglutamase.
  
  
 0.499
Oant_2448
PFAM: 17 kDa surface antigen; KEGG: bmb:BruAb1_1740 lipoprotein, hypothetical.
       0.444
Oant_2452
KEGG: sit:TM1040_0076 lipopolysaccharide biosynthesis protein-like.
       0.406
Oant_2437
PFAM: Gluconate transporter; Citrate transporter; KEGG: bja:bll7963 hypothetical protein.
  
     0.401
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.