STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_2499TIGRFAM: putative agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: bms:BR0789 agmatinase, putative; Belongs to the arginase family. (316 aa)    
Predicted Functional Partners:
Oant_4245
PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: bmb:BruAb2_0099 decarboxylase, ornithine/DAP/arginine decarboxylase family 2; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.926
Oant_1048
Agmatine deiminase; PFAM: Porphyromonas-type peptidyl-arginine deiminase; KEGG: sil:SPO2980 porphyromonas-type peptidyl-arginine deiminase family protein; Belongs to the agmatine deiminase family.
    
 0.915
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily.
     
 0.655
Oant_2498
KEGG: ret:RHE_CH01072 hypothetical protein.
       0.654
hutH
TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase; KEGG: bmb:BruAb2_0303 HutH, histidine ammonia-lyase; Belongs to the PAL/histidase family.
  
  
 0.620
Oant_2501
3''-kinase; PFAM: aminoglycoside/hydroxyurea antibiotic resistance kinase; KEGG: mlo:mll8451 streptomycin phosphotransferase, streptomycin-resistance.
       0.563
Oant_0303
TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Glycine cleavage T-protein barrel; KEGG: bms:BR0231 sarcosine oxidase, alpha subunit.
 
  
 0.559
Oant_3846
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
  
 0.556
Oant_0409
Integral membrane sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bms:BR0316 sensor histidine kinase/response regulator.
  
  
 0.537
Oant_3937
PFAM: FAD dependent oxidoreductase; KEGG: bms:BRA0770 D-amino acid oxidase family protein.
 
  
 0.509
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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