STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_2503KEGG: bmb:BruAb1_0800 hypothetical protein. (72 aa)    
Predicted Functional Partners:
Oant_2504
KEGG: mlo:mll8447 hypothetical protein.
 
     0.866
Oant_4270
KEGG: bms:BRA0072 hypothetical protein.
  
     0.710
Oant_1019
KEGG: bmb:BruAb1_1923 hypothetical protein.
 
     0.697
Oant_1769
PFAM: AsmA family protein; KEGG: bms:BR1408 hypothetical protein.
  
     0.681
Oant_3695
KEGG: bmb:BruAb2_0599 hypothetical protein.
  
     0.675
Oant_2093
KEGG: bms:BR1011 hypothetical protein.
  
     0.674
Oant_2679
KEGG: bmb:BruAb1_0602 hypothetical protein.
  
     0.652
Oant_2617
KEGG: bms:BR0669 hypothetical protein.
  
     0.648
Oant_1635
KEGG: bmb:BruAb1_1521 lipoprotein, hypothetical.
  
     0.645
Oant_1171
PFAM: protein of unknown function DUF465; KEGG: bmb:BruAb1_1726 hypothetical protein.
  
     0.640
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.