STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_2546PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: bms:BR0746 monooxygenase. (408 aa)    
Predicted Functional Partners:
Oant_3238
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: atc:AGR_C_2205 hypothetical protein.
   
 
 0.913
Oant_4051
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: atc:AGR_C_2205 hypothetical protein.
   
 
 0.913
Oant_2545
KEGG: bmb:BruAb1_0764 hypothetical protein.
 
     0.792
Oant_2982
PFAM: monooxygenase FAD-binding; KEGG: nwi:Nwi_2327 hypothetical protein.
  
   
 0.470
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
       0.442
Oant_2543
PFAM: Ppx/GppA phosphatase; KEGG: bme:BMEI1204 exopolyphosphatase.
       0.441
Oant_3860
KEGG: mlo:mll1065 hypothetical protein.
   
 
 0.428
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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