STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_2555TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR0744 amino acid ABC transporter, permease protein. (385 aa)    
Predicted Functional Partners:
Oant_2556
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bme:BMEI1210 general L-amino acid transport system permease protein AapQ.
 
0.998
Oant_2554
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb1_0762 amino acid ABC transporter, ATP-binding protein.
 
 0.996
Oant_2557
TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; SMART: extracellular solute-binding protein family 3; KEGG: bms:BR0741 amino acid ABC transporter, periplasmic amino acid-binding protein.
 
 0.988
Oant_1406
SMART: extracellular solute-binding protein family 3; KEGG: bms:BRA0948 amino acid ABC transporter, periplasmic amino acid-binding protein.
 
 0.962
Oant_3745
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMa0083 putative ABC transporter ATP-binding protein.
 
 
 0.890
Oant_3499
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfl:PFL_2357 glutamine ABC transporter, ATP-binding protein.
 
 
 0.780
Oant_2851
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfl:PFL_2357 glutamine ABC transporter, ATP-binding protein.
 
 
 0.752
Oant_4075
PFAM: SMC domain protein; ABC transporter related; SMART: AAA ATPase; KEGG: bja:blr8119 ABC transporter ATP-binding protein.
 
 
 0.747
Oant_3462
TIGRFAM: Ectoine/hydroxyectoine ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_L_257 probable amino-acid ABC transporter ATP-binding protein Y4TH.
 
 
 0.716
Oant_3810
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bms:BRA0684 amino acid ABC transporter, ATP-binding protein.
 
 
 0.697
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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