STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_2582KEGG: bms:BR0704 hypothetical protein. (155 aa)    
Predicted Functional Partners:
Oant_1769
PFAM: AsmA family protein; KEGG: bms:BR1408 hypothetical protein.
  
     0.762
Oant_0600
KEGG: bms:BR0486 lipoprotein, putative.
  
     0.758
Oant_0928
PFAM: outer membrane lipoprotein omp19; KEGG: bmb:BruAb1_1906 Omp19, lipoprotein Omp19.
  
     0.752
Oant_2111
KEGG: bmf:BAB1_1043 hypothetical protein.
 
   
 0.741
Oant_1635
KEGG: bmb:BruAb1_1521 lipoprotein, hypothetical.
  
     0.731
Oant_1447
KEGG: bms:BRA0921 outer surface protein.
  
    0.726
Oant_1649
KEGG: bms:BR1516 hypothetical protein.
  
     0.723
Oant_2682
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: bmb:BruAb1_0599 hypothetical peptidoglycan-binding protein.
 
     0.716
Oant_1225
Porin opacity type; PFAM: surface antigen msp4 family protein; porin opacity type; KEGG: bms:BR1689 outer surface protein.
  
    0.711
Oant_1349
KEGG: bmb:BruAb2_0972 hypothetical membrane protein.
  
     0.705
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.