STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_2593PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: bms:BR0695 hypothetical protein. (267 aa)    
Predicted Functional Partners:
Oant_0553
PFAM: Peptidoglycan-binding LysM; KEGG: bmb:BruAb1_0463 LysM domain protein.
   
    0.764
Oant_2136
TIGRFAM: flavoprotein WrbA; PFAM: NADPH-dependent FMN reductase; flavodoxin/nitric oxide synthase; KEGG: bms:BR1049 trp repressor binding protein.
   
  
 0.727
Oant_4291
KEGG: ret:RHE_PE00021 hypothetical protein.
   
  
 0.727
Oant_4098
PFAM: secretion protein HlyD family protein; KEGG: sme:SMa0669 hypothetical protein.
  
     0.551
Oant_4097
KEGG: sme:SMa0667 hypothetical protein.
  
     0.545
Oant_2592
PFAM: molybdopterin biosynthesis MoaE protein; KEGG: bmb:BruAb1_0715 MoaE, molybdopterin converting factor, subunit 2.
       0.539
Oant_1702
KEGG: bmb:BruAb1_1464 hypothetical protein.
 
     0.527
Oant_1251
KEGG: bmb:BruAb1_1648 hypothetical protein.
  
  
 0.490
Oant_2713
Alpha,alpha-trehalose-phosphate synthase (UDP-forming); Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-alpha-D- glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose- 6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor; Belongs to the glycosyltransferase 20 family.
  
    0.487
Oant_3962
KEGG: mlo:mll4938 hypothetical protein.
  
     0.467
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.