STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_2649PFAM: protein of unknown function DUF423; KEGG: bmb:BruAb1_0652 hypothetical protein. (124 aa)    
Predicted Functional Partners:
Oant_2648
PFAM: aminotransferase class I and II; KEGG: bms:BR0635 histidinol-phosphate aminotransferase, putative.
       0.737
Oant_1818
PFAM: NUDIX hydrolase; KEGG: bmb:BruAb1_1371 hypothetical protein.
 
    0.729
Oant_0173
PFAM: protein of unknown function DUF1150; KEGG: bmb:BruAb1_0158 hypothetical protein.
  
     0.680
Oant_1232
KEGG: bms:BR1681 hypothetical protein.
  
     0.671
Oant_2123
KEGG: bmb:BruAb1_1043 hypothetical protein.
  
     0.626
Oant_1573
KEGG: bmb:BruAb1_1582 hypothetical protein.
  
     0.609
Oant_0401
KEGG: bms:BR0308 hypothetical protein.
  
     0.602
Oant_1372
KEGG: bms:BRA0988 WD-repeat family protein.
 
     0.585
Oant_0117
PFAM: protein of unknown function DUF930; KEGG: bmb:BruAb1_0101 hypothetical protein.
  
     0.584
Oant_1908
KEGG: bms:BR1284 hypothetical protein.
  
     0.571
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.