STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_2654KEGG: bmb:BruAb1_0646 hypothetical protein. (115 aa)    
Predicted Functional Partners:
Oant_1617
KEGG: bmb:BruAb1_1538 hypothetical protein.
  
     0.556
Oant_4270
KEGG: bms:BRA0072 hypothetical protein.
  
     0.538
Oant_2240
PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: bmf:BAB1_0967 membrane protein involved in aromatic hydrocarbon degradation.
 
    0.505
Oant_2261
KEGG: bmb:BruAb1_0934 hypothetical protein.
  
     0.468
Oant_1019
KEGG: bmb:BruAb1_1923 hypothetical protein.
  
     0.460
Oant_2694
KEGG: bmb:BruAb1_0584 hypothetical protein.
  
     0.438
Oant_1349
KEGG: bmb:BruAb2_0972 hypothetical membrane protein.
  
     0.424
Oant_3679
KEGG: bmb:BruAb2_0612 hypothetical protein.
  
     0.413
Oant_4224
PFAM: regulatory protein LuxR; KEGG: bmb:BruAb2_0117 transcriptional regulator, LuxR family.
  
     0.413
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.