STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_2655PFAM: Glutathione S-transferase domain; KEGG: bme:BMEI1316 glutathione S-transferase; Belongs to the GST superfamily. (235 aa)    
Predicted Functional Partners:
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.548
Oant_1991
PFAM: Glutathione S-transferase domain; KEGG: ret:RHE_CH02320 glutathione S-transferase protein.
  
  
 0.518
Oant_0144
TIGRFAM: Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bme:BMEI1819 alcohol dehydrogenase class III; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
   
 0.512
Oant_2238
PFAM: Glutathione S-transferase domain; KEGG: bms:BR0951 glutathione S-transferase domain protein.
 
   
 0.471
Oant_2391
TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: bms:BR0835 glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily.
 
  
 0.462
Oant_2005
PFAM: protein of unknown function DUF924; KEGG: bms:BR1186 hypothetical protein.
  
     0.445
Oant_0787
PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: mlo:mll4752 hypothetical protein.
  
    0.440
Oant_0141
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
  
    0.421
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.407
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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