STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_2659TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: bmb:BruAb1_0639 phage SPO1 DNA polymerase-related protein. (285 aa)    
Predicted Functional Partners:
Oant_2639
PFAM: Uracil-DNA glycosylase superfamily; KEGG: bmb:BruAb1_0665 SPO1 DNA polymerase-related protein.
  
  
 0.925
Oant_4300
TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: mes:Meso_2840 phage SPO1 DNA polymerase-related protein.
  
  
 
0.923
Oant_1061
PFAM: peptidase M23B; KEGG: bmb:BruAb1_1817 hypothetical protein.
   
   0.514
Oant_2660
PFAM: major facilitator superfamily MFS_1; KEGG: bmb:BruAb1_0638 transporter.
       0.481
Oant_0761
PFAM: peptidase M22 glycoprotease; KEGG: bmb:BruAb1_2124 protease, hypothetical.
  
    0.465
gpmA
Phosphoglycerate mutase 1 family; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
  
    0.443
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.