STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_2913PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bms:BRA0860 ribose ABC transporter, ATP-binding protein. (514 aa)    
Predicted Functional Partners:
Oant_2914
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bmb:BruAb2_0372 ribose ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
  0.979
Oant_2915
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bmb:BruAb2_0373 RbsB-2, ribose ABC transporter, periplasmic D-ribose-binding protein.
 
  0.973
Oant_3064
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb20349 probable ABC transporter sugar-binding protein.
  
  0.949
Oant_3061
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: sme:SMb20352 probable sugar ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.946
Oant_2912
KEGG: bmb:BruAb2_0370 hypothetical protein.
 
     0.942
Oant_3062
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_PF00035 probable ribose ABC transporter, ATP-binding protein.
  
  
 
0.906
Oant_4066
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bmb:BruAb1_1619 RbsC-2, ribose ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
   0.654
Oant_2909
KEGG: bmb:BruAb2_0366 EryC, D-erythrulose-1-phosphate dehydrogenase.
 
    0.639
Oant_3063
KEGG: sme:SMb20350 hypothetical protein.
 
     0.624
Oant_4067
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bms:BR1630 sugar-binding transcriptional regulator, LacI family.
  
   0.535
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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