STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_2940PFAM: extracellular solute-binding protein family 1; KEGG: bmb:BruAb2_0877 sugar ABC transporter, periplasmic sugar-binding protein. (421 aa)    
Predicted Functional Partners:
Oant_2941
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA0305 sugar ABC transporter, permease protein.
  0.985
Oant_2942
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA0306 sugar ABC transporter, permease protein.
 
  0.985
Oant_2943
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bms:BRA0307 sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
  0.935
Oant_3550
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bmb:BruAb2_0702 sugar ABC transporter, ATP-binding protein.
  
  0.871
Oant_3851
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: csa:Csal_2614 ABC transporter related.
  
  0.871
Oant_0363
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_C_4555 hypothetical protein.
 
 
 0.651
Oant_3852
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_01296 ABC-type sugar transport system, permease component.
 
 
 0.647
Oant_0353
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL110365 putative permease component of ABC transporter.
   0.631
Oant_0352
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01979 putative sugar transport system permease ABC transporter protein.
 
   0.615
Oant_3897
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb2_0482 hypothetical sugar ABC transporter, permease protein.
 
   0.612
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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