STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_2960PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20479 putative dipeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (265 aa)    
Predicted Functional Partners:
Oant_2958
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20477 putative didpeptide ABC transporter permease protein.
    0.944
Oant_2959
ABC transporter related; PFAM: binding-protein-dependent transport systems inner membrane component; ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20478 putative dipeptide ABC transporter permease and ATP-binding protein.
 
  
0.925
Oant_2957
4-phytase; PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMb20476 putative ABC transporter periplasmic dipeptide-binding protein.
 
    0.865
Oant_2961
PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMb20480 putative transcriptional regulator protein.
 
     0.811
Oant_3785
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0106 putative ABC transporter, permease.
    0.788
Oant_3966
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb2_0448 peptide ABC transporter, permease protein.
    0.751
Oant_3318
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rru:Rru_A2012 binding-protein-dependent transport systems inner membrane component.
    0.747
Oant_2472
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_4339 binding-protein-dependent transport systems inner membrane component.
    0.720
Oant_2986
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_3102 dipeptide abc transporter, dipeptide-binding protein.
    0.698
Oant_3802
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_692 oligopeptide ABC transporter (permease).
    0.693
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.