STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_3079PFAM: carbohydrate kinase FGGY; KEGG: ret:RHE_PB00071 L-xylulose kinase protein; Belongs to the FGGY kinase family. (511 aa)    
Predicted Functional Partners:
Oant_2917
PFAM: carbohydrate kinase FGGY; KEGG: rle:pRL120198 putative L-xylulose kinase.
  
  
 
0.913
Oant_3573
TIGRFAM: L-rhamnose catabolism isomerase; PFAM: Xylose isomerase domain protein TIM barrel; KEGG: ret:RHE_PE00292 putative sugar isomerase protein.
    
 0.906
Oant_3078
PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: ret:RHE_PB00072 putative aldolase protein.
  
 0.889
Oant_3077
PFAM: FAD dependent oxidoreductase; KEGG: ret:RHE_PB00073 probable glycerol-3-phosphate dehydrogenase protein.
 
  
 0.867
Oant_3075
Transcriptional regulator, DeoR family; PFAM: putative sugar-binding domain protein; KEGG: ret:RHE_PB00075 putative transcriptional regulator protein, CRP family.
 
  
 0.831
Oant_3072
KEGG: sme:SMb20504 putative ABC transporter periplasmic sugar-binding protein.
 
  
 0.783
Oant_3076
PFAM: aldo/keto reductase; KEGG: ret:RHE_PB00074 probable aldoketo reductase protein.
 
    0.751
Oant_3074
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: ret:RHE_PB00076 probable sugar ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
    0.717
rbsA-2
ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
    0.581
Oant_2918
PFAM: FAD dependent oxidoreductase; KEGG: rle:pRL120197 putative glycerol-3-phosphate dehydrogenase.
 
  
 0.557
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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