STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_3149PFAM: domain of unknown function DUF1738; KEGG: pde:Pden_1544 domain of unknown function DUF1738. (318 aa)    
Predicted Functional Partners:
Oant_3150
KEGG: pde:Pden_1543 hypothetical protein.
     0.983
Oant_3174
KEGG: mes:Meso_3828 probably methylase/helicase.
     0.899
Oant_3151
KEGG: nwi:Nwi_2123 hypothetical protein.
 
     0.782
Oant_3220
TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: pde:Pden_1476 conjugal transfer protein TrbG/VirB9/CagX.
     0.714
Oant_3221
PFAM: conjugation TrbI family protein; KEGG: pde:Pden_1475 conjugation TrbI family protein.
 
     0.570
Oant_3190
PFAM: protein of unknown function DUF736; KEGG: pde:Pden_1509 protein of unknown function DUF736.
  
     0.562
Oant_3180
KEGG: mes:Meso_0527 hypothetical protein.
  
     0.540
Oant_3189
KEGG: pde:Pden_1510 conjugal transfer protein precursor.
 
     0.530
Oant_3153
KEGG: rle:pRL70010 hypothetical protein.
 
     0.528
Oant_3192
KEGG: pde:Pden_1507 hypothetical protein.
 
     0.495
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.