STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_3151KEGG: nwi:Nwi_2123 hypothetical protein. (716 aa)    
Predicted Functional Partners:
Oant_3152
KEGG: mes:Meso_3820 hypothetical protein.
 
     0.881
Oant_3175
KEGG: nwi:Nwi_2129 hypothetical protein.
 
     0.800
Oant_3176
KEGG: nwi:Nwi_2130 hypothetical protein.
 
     0.792
Oant_3149
PFAM: domain of unknown function DUF1738; KEGG: pde:Pden_1544 domain of unknown function DUF1738.
 
     0.782
Oant_3174
KEGG: mes:Meso_3828 probably methylase/helicase.
 
     0.781
Oant_3169
KEGG: pde:Pden_1536 hypothetical protein.
 
     0.774
Oant_1544
KEGG: mes:Meso_2348 hypothetical protein.
 
     0.769
Oant_3170
KEGG: pde:Pden_1535 hypothetical protein.
  
     0.740
Oant_3190
PFAM: protein of unknown function DUF736; KEGG: pde:Pden_1509 protein of unknown function DUF736.
  
     0.740
Oant_3185
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: mes:Meso_2336 cobyrinic acid a,c-diamide synthase.
 
 
 0.726
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.