STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_3194KEGG: pde:Pden_1505 hypothetical protein. (149 aa)    
Predicted Functional Partners:
Oant_3193
PFAM: TRAG family protein; KEGG: pde:Pden_1506 TraG family protein.
 
     0.949
Oant_3192
KEGG: pde:Pden_1507 hypothetical protein.
 
     0.936
Oant_3190
PFAM: protein of unknown function DUF736; KEGG: pde:Pden_1509 protein of unknown function DUF736.
 
     0.866
Oant_3183
KEGG: mes:Meso_3841 putative transcriptional regulator.
 
   
 0.851
Oant_3188
KEGG: pde:Pden_1511 hypothetical protein.
 
     0.850
Oant_3189
KEGG: pde:Pden_1510 conjugal transfer protein precursor.
 
     0.850
Oant_3184
KEGG: pde:Pden_1512 replication protein A.
 
     0.840
Oant_3187
KEGG: bja:bsl0049 hypothetical protein.
 
     0.834
Oant_3180
KEGG: mes:Meso_0527 hypothetical protein.
 
     0.808
Oant_3214
KEGG: pde:Pden_1482 conjugal transfer protein TrbB.
 
     0.800
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.