STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_3248PFAM: DSBA oxidoreductase; KEGG: rpd:RPD_4245 DsbA oxidoreductase. (226 aa)    
Predicted Functional Partners:
Oant_3247
PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: rpb:RPB_4360 thiol:disulfide interchange protein.
 
 
 0.949
Oant_3249
KEGG: rpb:RPB_4360 thiol:disulfide interchange protein.
 
 
 0.918
Oant_3246
Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: ttj:TTHA0840 probable thiol:disulfide interchange protein.
 
 
 0.880
Oant_0472
PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: rpb:RPB_4360 thiol:disulfide interchange protein.
 
 
 0.719
Oant_3251
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rpd:RPD_4242 ATP-binding region, ATPase-like.
 
     0.612
Oant_3164
PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: mes:Meso_4144 phage integrase-like SAM-like; Belongs to the 'phage' integrase family.
 
    0.584
Oant_3173
PFAM: Antirestriction protein; KEGG: mes:Meso_4600 antirestriction protein.
  
     0.564
Oant_3230
TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: cytochrome d1 heme region; protein of unknown function DUF305; KEGG: net:Neut_0066 40-residue YVTN family beta-propeller repeat protein.
  
     0.523
Oant_3250
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: atc:AGR_L_2979 hypothetical protein.
 
    0.506
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.491
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.