STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_3255PFAM: IucA/IucC family protein; KEGG: gbe:GbCGDNIH1_2376 aerobactin siderophore biosynthesis protein IucC. (621 aa)    
Predicted Functional Partners:
Oant_3254
KEGG: ret:RHE_PF00456 L-lysine 6-monooxygenase (lysine N(6)-hydroxylase) protein.
 
  
 0.988
Oant_3256
Hypothetical protein; KEGG: gbe:GbCGDNIH1_2377 N(6)-hydroxylysine O-acetyltransferase.
 
  
 0.987
Oant_3257
PFAM: IucA/IucC family protein; KEGG: gbe:GbCGDNIH1_2378 aerobactin siderophore biosynthesis protein IucA.
  
0.987
Oant_3258
PFAM: major facilitator superfamily MFS_1; KEGG: gbe:GbCGDNIH1_2379 transporter, MFS superfamily.
 
  
 0.707
Oant_3260
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: noc:Noc_1820 TonB-dependent receptor.
 
  
 0.577
Oant_3259
TIGRFAM: Siderophore transporter RhtX/FptX family; PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMa2337 putative transmembrane transport protein.
 
   
 0.458
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.