STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_3260PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: noc:Noc_1820 TonB-dependent receptor. (739 aa)    
Predicted Functional Partners:
Oant_3259
TIGRFAM: Siderophore transporter RhtX/FptX family; PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMa2337 putative transmembrane transport protein.
 
     0.899
Oant_1217
KEGG: bms:BR1698 TolA protein.
  
 
 0.648
Oant_1256
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
 
 0.648
Oant_1652
PFAM: protease inhibitor Kazal-type; KEGG: sme:SMc04226 hypothetical lipoprotein transmembrane.
  
 
 0.632
Oant_3256
Hypothetical protein; KEGG: gbe:GbCGDNIH1_2377 N(6)-hydroxylysine O-acetyltransferase.
 
   
 0.623
Oant_3255
PFAM: IucA/IucC family protein; KEGG: gbe:GbCGDNIH1_2376 aerobactin siderophore biosynthesis protein IucC.
 
  
 0.577
Oant_2775
anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: rpa:RPA3281 probable FecR, iron siderophore sensor protein.
 
  
 0.564
Oant_3182
KEGG: pde:Pden_1514 hypothetical protein.
  
     0.559
Oant_2777
PFAM: periplasmic binding protein; KEGG: rsp:RSP_4272 ABC cobalamin/Fe3+-siderophore transporter, periplasmic ligand binding protein.
 
  
 0.524
Oant_4087
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rpb:RPB_2695 TonB-dependent receptor.
 
  
 0.514
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.