STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_3307PFAM: inner-membrane translocator; KEGG: rle:pRL90206 putative permease component of ABC transporter; Belongs to the binding-protein-dependent transport system permease family. (347 aa)    
Predicted Functional Partners:
Oant_3306
PFAM: inner-membrane translocator; KEGG: sme:SMa2369 putative ABC transporter, permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.995
Oant_3308
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:pRL90205 putative ATP-binding component of ABC transporter.
 
 
 0.994
Oant_3310
PFAM: basic membrane lipoprotein; KEGG: sme:SMa2361 hypothetical protein.
 
 
 0.987
Oant_3630
PFAM: inner-membrane translocator; KEGG: bms:BRA0568 ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.981
Oant_3632
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb2_0654 ABC transporter, ATP-binding protein.
 
 
 0.976
Oant_4442
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb2_0009 ABC transporter, ATP-binding protein.
 
 
 0.975
Oant_4441
PFAM: basic membrane lipoprotein; KEGG: bms:BRA0010 lipoprotein, Bmp family.
 
 
 0.965
Oant_3629
PFAM: basic membrane lipoprotein; KEGG: bms:BRA0567 bmp family protein.
 
 
 0.963
Oant_4444
PFAM: inner-membrane translocator; KEGG: bms:BRA0007 ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.938
Oant_4443
PFAM: inner-membrane translocator; KEGG: bmb:BruAb2_0008 hypothetical ABC transporter, permease protein.
  
  
 
0.921
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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