Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Oant_3333PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: bmb:BruAb2_0764 hypothetical protein. (145 aa)    
Predicted Functional Partners:
Oant_3332
PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: bmb:BruAb2_0765 hypothetical protein.
 
     0.959
Oant_3331
PFAM: regulatory protein ArsR; KEGG: bmb:BruAb2_0766 transcriptional regulator, ArsR family.
       0.789
cysN
Sulfate adenylyltransferase, large subunit; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
   
  
 0.672
Oant_3330
PFAM: phospholipase/Carboxylesterase; KEGG: sme:SMb21203 putative esteraselipase/thioesterase protein.
       0.517
Oant_3334
PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_C_3190 ABC transporter (ATP-binding protein).
       0.484
Oant_3329
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMb21202 hypothetical protein.
       0.469
Oant_0904
PFAM: SirA family protein; KEGG: bmb:BruAb1_2009 hypothetical protein; Belongs to the sulfur carrier protein TusA family.
  
  
 0.406
Oant_4377
KEGG: bmb:BruAb2_0925 hypothetical protein.
  
  
 0.406
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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