STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_3366PFAM: major facilitator superfamily MFS_1; KEGG: pfl:PFL_1525 major facilitator family transporter. (433 aa)    
Predicted Functional Partners:
Oant_0307
PFAM: amidohydrolase 2; KEGG: bme:BMEI1718 purine/pyrimidine phosphoribosyl transferase.
  
  
 0.711
Oant_0314
PFAM: protein of unknown function DUF718; KEGG: bmb:BruAb1_0235 hypothetical protein.
  
  
 0.606
Oant_3365
PFAM: TOBE domain protein; KEGG: rpb:RPB_0855 molybdenum-pterin binding protein.
       0.504
Oant_4011
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bca:BCE_0464 benzoate transport protein, putative.
  
    0.495
Oant_2898
PFAM: dihydrodipicolinate synthetase; KEGG: mlo:mll6811 dihydroxydipicolinate synthase; Belongs to the DapA family.
  
  
 0.439
Oant_3294
PFAM: dihydrodipicolinate synthetase; KEGG: mlo:mll6376 dihydrodipicolinate synthetase; Belongs to the DapA family.
  
  
 0.439
Oant_3336
PFAM: dihydrodipicolinate synthetase; KEGG: rle:pRL120776 putative dihydropicolinate synthase; Belongs to the DapA family.
  
  
 0.439
Oant_4433
PFAM: extracellular solute-binding protein family 1; KEGG: pol:Bpro_3941 extracellular solute-binding protein, family 1.
 
    0.438
Oant_3400
PFAM: amino acid permease-associated region; KEGG: atc:AGR_L_2082 L-asparagine permease.
  
    0.433
Oant_4009
PFAM: major facilitator superfamily MFS_1; KEGG: ppu:PP_1710 MFS transporter, phthalate permease family.
  
     0.431
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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